Mac and Cheese Breakfast Muffins

Featured in: Homestyle Baking

Start your day with these savory muffins featuring tender macaroni, a rich blend of cheddar and mozzarella cheeses, and fluffy eggs. With the option to add in bacon, ham, spinach, or green onions, they deliver variety in each bite. Easy to prepare and great for meal prep, these muffins are hearty, portable, and satisfying—perfect for busy mornings or family brunches. Enjoy them hot from the oven or make ahead for a protein-packed grab-and-go option throughout the week!

Updated on Fri, 03 Oct 2025 19:30:24 GMT
Golden, cheesy Mac and Cheese Breakfast Egg Muffins arranged warm in a muffin tin, ready for serving. Save
Golden, cheesy Mac and Cheese Breakfast Egg Muffins arranged warm in a muffin tin, ready for serving. | forkina.com

Mac and Cheese Breakfast Egg Muffins are my answer to chaotic mornings. Imagine creamy mac and cheese reimagined as a hand-held breakfast you can pack, share, or grab as you run out the door. These muffins have all the cozy flavor of comfort food but with a high-protein upgrade. Whether you are prepping for a busy week or need something kid-friendly that still feels a little special, this is a go-to favorite.

My family begs for these when we want something fun on weekend mornings. They even make appearances at our brunch parties and potlucks, since no one can resist cheesy mac tucked into breakfast form.

Ingredients

  • Elbow macaroni: It creates satisfying bite and holds shape in each muffin Choose a smaller pasta so it mixes evenly
  • Large eggs: The backbone of the muffins binds and adds plenty of protein Use fresh eggs for the best rise
  • Milk: Adds creaminess and helps the eggs puff up whole or 2 percent both work
  • Salt: Helps lift all the flavors of cheese and pasta Taste your cheese and adjust if needed
  • Black pepper: Gives gentle heat and balances the cheese
  • Smoked paprika: For a subtle smoky note use sweet smoked for a traditional mac and cheese vibe
  • Cheddar cheese: Gives signature tang and gooeyness Sharp cheddar has the boldest flavor
  • Mozzarella cheese: Melts beautifully for the ultimate pull Choose a low-moisture block and shred it yourself
  • Diced cooked bacon or ham: Adds savory bite and saltiness but totally optional
  • Chopped spinach: For extra veggie power and a hint of color Fresh or thawed frozen both work
  • Finely chopped green onions: That zip of freshness finish Try chives as a swap

Instructions

Preheat and Prepare the Pan:
Set your oven to 350 degrees Fahrenheit so it is ready as soon as your mix is done Grease every muffin cup with nonstick spray or line with silicone sleeves to prevent sticking
Cook the Macaroni:
In a medium saucepan simmer the elbow macaroni in salted water Stir occasionally This prevents clumping and ensures every piece is al dente Drain thoroughly and spread out on a plate to cool slightly so it does not scramble your eggs
Mix the Egg Base:
In a large bowl break in the eggs then whisk with milk salt black pepper and smoked paprika Blend until completely homogenous A well mixed egg base ensures the muffins puff evenly
Stir in Cheese Pasta and Add Ins:
Fold the cooled macaroni into the egg mixture Add both kinds of cheese Sprinkle in bacon spinach or green onions if using Gently stir everything so every bite will be cheesy and flavorful
Fill Muffin Cups Evenly:
Spoon the mixture into each muffin cup until about three quarters full Tap the pan to settle any pockets so the muffins bake up sturdy
Bake Until Puff and Set:
Bake in the middle of your oven for about twenty five minutes Look for golden tops and a steady center If they jiggle a lot give them another couple minutes
Cool and Release:
Let the muffins sit in the pan for at least five minutes This helps them pull away from the sides and come out clean Use a butter knife to help lift if needed Serve warm for the best melt
Close-up of fluffy Mac and Cheese Breakfast Egg Muffins packed with melty cheese and tender pasta. Pin it
Close-up of fluffy Mac and Cheese Breakfast Egg Muffins packed with melty cheese and tender pasta. | forkina.com

My favorite moment with these muffins was watching my niece learn to make them herself last summer swirling cheese strings around her finger like a tiny chef Before long she insisted on baking a double batch for the whole family

Storage Tips

Cool the muffins completely before storing to prevent sogginess I keep mine layered between paper towels in an airtight container in the fridge and they are good for four days For longer storage wrap individually and freeze They reheat best in the microwave or a low oven so the eggs stay soft inside

Ingredient Substitutions

Try using gluten free pasta for allergy needs and any shredded cheese combination that melts well Monterey jack or gouda are personal favorites For extra nutrition add finely diced bell peppers or swap spinach with kale If you love spice try jalapenos in place of green onions

Serving Suggestions

These make a wonderful main for breakfast but also work as a snack packed into a lunchbox Pair with fresh fruit or a simple green salad on weekends For kids cut them into halves for perfect hand held bites Sometimes I serve them with warm marinara on the side for that classic mac and cheese nostalgia

Cultural and Historical Context

Mac and cheese has graced American tables since at least the eighteenth century Often a dinner side or childhood classic so many cooks look for ways to make it fresh and portable These egg muffins let you enjoy all that comfort with a new breakfast twist a true nod to American inventiveness

Seasonal Adaptations

Fold in roasted tomatoes during tomato season Chop in asparagus tips in early spring Add cooked butternut squash cubes for a fall riff

Success Stories

I first brought a tray of these to a school breakfast and by midmorning someone asked for the recipe They became a weekend staple in a neighbor s house and were a hit at a recent friend s brunch The best feedback I get is how easy they are for any level of cook

Freezer Meal Conversion

Flash freeze cooled muffins on a tray so they do not stick then tuck into freezer bags Defrost in the refrigerator overnight or microwave straight from the freezer for a fast bite No more skipping breakfast on busy mornings

Mac and Cheese Breakfast Egg Muffins on a plate, perfect for an easy, protein-rich morning meal. Pin it
Mac and Cheese Breakfast Egg Muffins on a plate, perfect for an easy, protein-rich morning meal. | forkina.com

With these Mac and Cheese Breakfast Egg Muffins you have a breakfast that is fast fun and customizable I cannot count how many times they have saved the morning and made little faces light up around my table

Frequently Asked Questions

Can I prepare these muffins ahead of time?

Yes, they keep well in the refrigerator for up to 4 days or can be frozen for up to 2 months. Reheat in the microwave until warm.

What kind of pasta works best?

Elbow macaroni is ideal, but other small pasta shapes like shells or mini penne will also work.

Can I add vegetables or meat?

Absolutely. Try adding spinach, bell peppers, mushrooms, green onions, bacon, or ham for extra flavor and nutrition.

Are these muffins gluten-free?

Use gluten-free pasta to make these muffins suitable for a gluten-free diet. Always check ingredient labels for allergens.

How can I vary the cheese flavor?

Swap cheddar for other cheeses like pepper jack, gouda, or mozzarella to experiment with taste and texture.

Mac and Cheese Breakfast Muffins

Cheesy pasta, eggs, and veggies baked into savory, portable muffins ideal for breakfast or snacks.

Prep Time
15 Minutes
Cook Time
25 Minutes
Total Time
40 Minutes

Category: Homestyle Baking

Difficulty: Easy

Cuisine: American

Yield: 12 servings

Dietary: Vegetarian

Ingredients

Pasta

01 1 cup elbow macaroni, uncooked

Egg Mixture

01 6 large eggs
02 0.5 cup milk
03 0.5 teaspoon salt
04 0.25 teaspoon black pepper
05 0.25 teaspoon smoked paprika (optional)

Cheese

01 1 cup shredded cheddar cheese
02 0.5 cup shredded mozzarella cheese

Add-Ins (Optional)

01 0.25 cup diced cooked bacon
02 0.25 cup chopped spinach
03 2 tablespoons finely chopped green onions

Instructions

Step 01

Preheat and Prepare Tin: Preheat oven to 350°F (175°C). Properly grease a 12-cup muffin tin or line with silicone cupcake liners.

Step 02

Cook and Cool Pasta: Prepare elbow macaroni according to package directions to achieve an al dente texture. Thoroughly drain and permit to cool slightly.

Step 03

Whisk Egg Mixture: In a large mixing bowl, vigorously whisk together the large eggs, milk, salt, black pepper, and smoked paprika, if using.

Step 04

Combine Ingredients: Introduce the cooled macaroni, shredded cheddar cheese, shredded mozzarella cheese, and any chosen add-ins to the whisked egg mixture. Stir until all components are uniformly incorporated.

Step 05

Portion Mixture: Distribute the combined mixture evenly into the prepared muffin cups, ensuring each cup is approximately three-quarters full.

Step 06

Bake Muffins: Bake for a duration of 20 to 25 minutes, or until the muffins are visibly puffed and firm to the touch in the center.

Step 07

Rest and Serve: Allow the muffins to cool in the tin for 5 minutes before carefully removing them. Serve warm.

Tools You'll Need

  • 12-cup muffin tin
  • Large mixing bowl
  • Whisk
  • Saucepan
  • Spoon or spatula

Allergy Information

Please check ingredients for potential allergens and consult a health professional if in doubt.
  • Contains wheat (from pasta), eggs, and milk (from cheese and milk).
  • Individuals with severe allergies should meticulously review all product packaging for potential cross-contamination.

Nutrition Facts (Per Serving)

It is important to consider this information as approximate and not to use it as definitive health advice.
  • Calories: 135
  • Total Fat: 7 g
  • Total Carbohydrate: 11 g
  • Protein: 7 g